Bioinformatics for Beginners

Bioinformatics for Beginners
Author: Supratim Choudhuri
Publsiher: Academic Press
Total Pages: 238
Release: 2014-05-12
ISBN 10: 9780124104716
ISBN 13: 0124104711
Language: EN, FR, DE, ES & NL

Bioinformatics for Beginners Book Review:

Bioinformatics for Beginners provides a coherent and friendly treatment of bioinformatics for any student or scientist within biology who has not routinely performed bioinformatic analysis. The book discusses relevant principles needed to understand the theoretical underpinnings of bioinformatic analysis, and demonstrates with examples targeted analysis using freely available web-based software and publicly available databases. Eschewing non-essential information, the work focuses on principles and hands-on analysis and points to many further study options. Avoids non-essential coverage yet fully describes the field for beginners - in approximately 200 pages of text Explains the molecular basis of evolution to place bioinformatic analysis in biological context Provides useful links to the vast resource of publicly available bioinformatic databases and analysis tools Over 100 figures aid in concept discovery and illustration

Bioinformatics Programming in Python

Bioinformatics Programming in Python
Author: Ruediger-Marcus Flaig
Publsiher: John Wiley & Sons
Total Pages: 428
Release: 2011-10-05
ISBN 10: 3527644903
ISBN 13: 9783527644902
Language: EN, FR, DE, ES & NL

Bioinformatics Programming in Python Book Review:

This first introductory book designed to train novice programmers is based on a student course taught by the author, and has been optimized for biology students without previous experience in programming. By interspersing theory chapters with numerous small and large programming exercises, the author quickly shows readers how to do their own programming, and throughout uses anecdotes and real-life examples from the biosciences to 'spice up' the text. This practical book thus teaches essential programming skills for life scientists who want -- or need -- to write their own bioinformatics software tools.

Beginning Perl for Bioinformatics

Beginning Perl for Bioinformatics
Author: James Tisdall
Publsiher: "O'Reilly Media, Inc."
Total Pages: 386
Release: 2001-10-22
ISBN 10: 9780596550479
ISBN 13: 0596550472
Language: EN, FR, DE, ES & NL

Beginning Perl for Bioinformatics Book Review:

With its highly developed capacity to detect patterns in data, Perl has become one of the most popular languages for biological data analysis. But if you're a biologist with little or no programming experience, starting out in Perl can be a challenge. Many biologists have a difficult time learning how to apply the language to bioinformatics. The most popular Perl programming books are often too theoretical and too focused on computer science for a non-programming biologist who needs to solve very specific problems.Beginning Perl for Bioinformatics is designed to get you quickly over the Perl language barrier by approaching programming as an important new laboratory skill, revealing Perl programs and techniques that are immediately useful in the lab. Each chapter focuses on solving a particular bioinformatics problem or class of problems, starting with the simplest and increasing in complexity as the book progresses. Each chapter includes programming exercises and teaches bioinformatics by showing and modifying programs that deal with various kinds of practical biological problems. By the end of the book you'll have a solid understanding of Perl basics, a collection of programs for such tasks as parsing BLAST and GenBank, and the skills to take on more advanced bioinformatics programming. Some of the later chapters focus in greater detail on specific bioinformatics topics. This book is suitable for use as a classroom textbook, for self-study, and as a reference.The book covers: Programming basics and working with DNA sequences and strings Debugging your code Simulating gene mutations using random number generators Regular expressions and finding motifs in data Arrays, hashes, and relational databases Regular expressions and restriction maps Using Perl to parse PDB records, annotations in GenBank, and BLAST output

Bioinformatics For Dummies

Bioinformatics For Dummies
Author: Jean-Michel Claverie,Cedric Notredame
Publsiher: John Wiley & Sons
Total Pages: 464
Release: 2006-12-18
ISBN 10: 0470089857
ISBN 13: 9780470089859
Language: EN, FR, DE, ES & NL

Bioinformatics For Dummies Book Review:

Were you always curious about biology but were afraid to sit through long hours of dense reading? Did you like the subject when you were in high school but had other plans after you graduated? Now you can explore the human genome and analyze DNA without ever leaving your desktop! Bioinformatics For Dummies is packed with valuable information that introduces you to this exciting new discipline. This easy-to-follow guide leads you step by step through every bioinformatics task that can be done over the Internet. Forget long equations, computer-geek gibberish, and installing bulky programs that slow down your computer. You’ll be amazed at all the things you can accomplish just by logging on and following these trusty directions. You get the tools you need to: Analyze all types of sequences Use all types of databases Work with DNA and protein sequences Conduct similarity searches Build a multiple sequence alignment Edit and publish alignments Visualize protein 3-D structures Construct phylogenetic trees This up-to-date second edition includes newly created and popular databases and Internet programs as well as multiple new genomes. It provides tips for using servers and places to seek resources to find out about what’s going on in the bioinformatics world. Bioinformatics For Dummies will show you how to get the most out of your PC and the right Web tools so you’ll be searching databases and analyzing sequences like a pro!

Beginners Guide To Bioinformatics For High Throughput Sequencing

Beginners Guide To Bioinformatics For High Throughput Sequencing
Author: Tan Tin Wee,Lee Eric Cheng-yu
Publsiher: World Scientific
Total Pages: 276
Release: 2018-10-05
ISBN 10: 9813230533
ISBN 13: 9789813230538
Language: EN, FR, DE, ES & NL

Beginners Guide To Bioinformatics For High Throughput Sequencing Book Review:

Biologists find computing bewildering; yet they are expected to be able to process the voluminous data available from the machines they buy and the datasets that has accumulated in genomic databanks worldwide. It is now increasingly difficult for them to avoid dealing with large volumes of data, that goes beyond just doing manual programming.Most books in this realm are full of equations and complex code but this book gives a much gentler entry point particularly for biologists, with code snippets users can use to cut and paste, and run on their Linux or MacOSX operating system or cloud instance. It also provides a step by step installation instructions which they can easily follow. Those who are in the field of genome sequencing and already familiar with the procedures of analysis, may also find this book useful in closing some knowledge gaps.High throughput sequencing requires high throughput and high performance computing. This book provides a gentle entry to high throughput sequencing by dealing with simple skills which the average biologist is increasingly required to master. You will find this book a breeze to read, and some suggestions in this book maybe new to you, something you might want to try out.

Essential Bioinformatics

Essential Bioinformatics
Author: Jin Xiong
Publsiher: Cambridge University Press
Total Pages: 329
Release: 2006-03-13
ISBN 10: 113945062X
ISBN 13: 9781139450621
Language: EN, FR, DE, ES & NL

Essential Bioinformatics Book Review:

Essential Bioinformatics is a concise yet comprehensive textbook of bioinformatics, which provides a broad introduction to the entire field. Written specifically for a life science audience, the basics of bioinformatics are explained, followed by discussions of the state-of-the-art computational tools available to solve biological research problems. All key areas of bioinformatics are covered including biological databases, sequence alignment, genes and promoter prediction, molecular phylogenetics, structural bioinformatics, genomics and proteomics. The book emphasizes how computational methods work and compares the strengths and weaknesses of different methods. This balanced yet easily accessible text will be invaluable to students who do not have sophisticated computational backgrounds. Technical details of computational algorithms are explained with a minimum use of mathematical formulae; graphical illustrations are used in their place to aid understanding. The effective synthesis of existing literature as well as in-depth and up-to-date coverage of all key topics in bioinformatics make this an ideal textbook for all bioinformatics courses taken by life science students and for researchers wishing to develop their knowledge of bioinformatics to facilitate their own research.

Bioinformatics A Beginner S Guide

Bioinformatics A Beginner S Guide
Author: Claverie
Publsiher: John Wiley & Sons
Total Pages: 329
Release: 2003
ISBN 10: 9788126503803
ISBN 13: 8126503807
Language: EN, FR, DE, ES & NL

Bioinformatics A Beginner S Guide Book Review:

Market_Desc: · Students· Biological Scientists· Chemists· Researchers· Biomedical Professionals Special Features: · Shows how to do sophisticated bioinformatics analysis without learning UNIX first· Helps researchers choose the right bioinformatics tool, use it effectively, and interpret the results.· Guides readers to the most helpful Web resources and freely available tools· Companion Web site contains the data sets used in the hands-on examples in the book and useful links to other sites About The Book: This book is dedicated to unspecialized users starting with bioinformatics from scratch, who are familiar with some biology. It explains the important relationship between the biological sciences and information technology, points readers in the direction of the most helpful Web resources and freely available tools. Many chapters in the book are devoted to addressing specific and common biological questions, problems, and projects.

Python Programming for Biology

Python Programming for Biology
Author: Tim J. Stevens,Wayne Boucher
Publsiher: Cambridge University Press
Total Pages: 711
Release: 2015-02-12
ISBN 10: 0521895839
ISBN 13: 9780521895835
Language: EN, FR, DE, ES & NL

Python Programming for Biology Book Review:

This book introduces Python as a powerful tool for the investigation of problems in computational biology, for novices and experienced programmers alike.

Python for Bioinformatics

Python for Bioinformatics
Author: Jason Kinser
Publsiher: Jones & Bartlett Publishers
Total Pages: 417
Release: 2010-10-25
ISBN 10: 1449613071
ISBN 13: 9781449613075
Language: EN, FR, DE, ES & NL

Python for Bioinformatics Book Review:

Bioinformatics is a growing field that attracts researchers from many different backgrounds who are unfamiliar with the algorithms commonly used in the field. Python for Bioinformatics provides a clear introduction to the Python programming language and instructs beginners on the development of simple programming exercises . Ideal for those with some knowledge of computer programming languages, this book emphasizes Python syntax and methodologies. The text is divided into three complete sections; the first provides an explanation of general Python programming, the second includes a detailed discussion of the Python tools typically used in bioinformatics including clustering, associative memories, and mathematical analysis techniques, and the third section demonstrates how these tools are implemented through numerous applications.

Python for Biologists

Python for Biologists
Author: Martin Jones
Publsiher: Createspace Independent Pub
Total Pages: 229
Release: 2013
ISBN 10:
ISBN 13: UCR:31210023746751
Language: EN, FR, DE, ES & NL

Python for Biologists Book Review:

Python for biologists is a complete programming course for beginners that will give you the skills you need to tackle common biological and bioinformatics problems.

Basics of Bioinformatics

Basics of Bioinformatics
Author: Rui Jiang,Xuegong Zhang,Michael Q. Zhang
Publsiher: Springer Science & Business Media
Total Pages: 395
Release: 2013-11-26
ISBN 10: 3642389511
ISBN 13: 9783642389511
Language: EN, FR, DE, ES & NL

Basics of Bioinformatics Book Review:

This book outlines 11 courses and 15 research topics in bioinformatics, based on curriculums and talks in a graduate summer school on bioinformatics that was held in Tsinghua University. The courses include: Basics for Bioinformatics, Basic Statistics for Bioinformatics, Topics in Computational Genomics, Statistical Methods in Bioinformatics, Algorithms in Computational Biology, Multivariate Statistical Methods in Bioinformatics Research, Association Analysis for Human Diseases: Methods and Examples, Data Mining and Knowledge Discovery Methods with Case Examples, Applied Bioinformatics Tools, Foundations for the Study of Structure and Function of Proteins, Computational Systems Biology Approaches for Deciphering Traditional Chinese Medicine, and Advanced Topics in Bioinformatics and Computational Biology. This book can serve as not only a primer for beginners in bioinformatics, but also a highly summarized yet systematic reference book for researchers in this field. Rui Jiang and Xuegong Zhang are both professors at the Department of Automation, Tsinghua University, China. Professor Michael Q. Zhang works at the Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.

Bioinformatics Programming Using Python

Bioinformatics Programming Using Python
Author: Mitchell L Model
Publsiher: "O'Reilly Media, Inc."
Total Pages: 528
Release: 2009-12-08
ISBN 10: 9781449382902
ISBN 13: 1449382908
Language: EN, FR, DE, ES & NL

Bioinformatics Programming Using Python Book Review:

Powerful, flexible, and easy to use, Python is an ideal language for building software tools and applications for life science research and development. This unique book shows you how to program with Python, using code examples taken directly from bioinformatics. In a short time, you'll be using sophisticated techniques and Python modules that are particularly effective for bioinformatics programming. Bioinformatics Programming Using Python is perfect for anyone involved with bioinformatics -- researchers, support staff, students, and software developers interested in writing bioinformatics applications. You'll find it useful whether you already use Python, write code in another language, or have no programming experience at all. It's an excellent self-instruction tool, as well as a handy reference when facing the challenges of real-life programming tasks. Become familiar with Python's fundamentals, including ways to develop simple applications Learn how to use Python modules for pattern matching, structured text processing, online data retrieval, and database access Discover generalized patterns that cover a large proportion of how Python code is used in bioinformatics Learn how to apply the principles and techniques of object-oriented programming Benefit from the "tips and traps" section in each chapter

Bioinformatics for Biologists

Bioinformatics for Biologists
Author: Pavel Pevzner,Ron Shamir
Publsiher: Cambridge University Press
Total Pages: 329
Release: 2011-09-15
ISBN 10: 1139501615
ISBN 13: 9781139501613
Language: EN, FR, DE, ES & NL

Bioinformatics for Biologists Book Review:

The computational education of biologists is changing to prepare students for facing the complex datasets of today's life science research. In this concise textbook, the authors' fresh pedagogical approaches lead biology students from first principles towards computational thinking. A team of renowned bioinformaticians take innovative routes to introduce computational ideas in the context of real biological problems. Intuitive explanations promote deep understanding, using little mathematical formalism. Self-contained chapters show how computational procedures are developed and applied to central topics in bioinformatics and genomics, such as the genetic basis of disease, genome evolution or the tree of life concept. Using bioinformatic resources requires a basic understanding of what bioinformatics is and what it can do. Rather than just presenting tools, the authors - each a leading scientist - engage the students' problem-solving skills, preparing them to meet the computational challenges of their life science careers.

Python for Bioinformatics

Python for Bioinformatics
Author: Sebastian Bassi
Publsiher: CRC Press
Total Pages: 424
Release: 2017-08-07
ISBN 10: 1351976958
ISBN 13: 9781351976954
Language: EN, FR, DE, ES & NL

Python for Bioinformatics Book Review:

In today's data driven biology, programming knowledge is essential in turning ideas into testable hypothesis. Based on the author’s extensive experience, Python for Bioinformatics, Second Edition helps biologists get to grips with the basics of software development. Requiring no prior knowledge of programming-related concepts, the book focuses on the easy-to-use, yet powerful, Python computer language. This new edition is updated throughout to Python 3 and is designed not just to help scientists master the basics, but to do more in less time and in a reproducible way. New developments added in this edition include NoSQL databases, the Anaconda Python distribution, graphical libraries like Bokeh, and the use of Github for collaborative development.

Bioinformatics Algorithms

Bioinformatics Algorithms
Author: Phillip Compeau,Pavel Pevzner
Publsiher: Unknown
Total Pages: 329
Release: 1986-06
ISBN 10: 9780990374633
ISBN 13: 0990374637
Language: EN, FR, DE, ES & NL

Bioinformatics Algorithms Book Review:

Bioinformatics Algorithms: an Active Learning Approach is one of the first textbooks to emerge from the recent Massive Online Open Course (MOOC) revolution. A light-hearted and analogy-filled companion to the authors' acclaimed online course (http://coursera.org/course/bioinformatics), this book presents students with a dynamic approach to learning bioinformatics. It strikes a unique balance between practical challenges in modern biology and fundamental algorithmic ideas, thus capturing the interest of students of biology and computer science students alike.Each chapter begins with a central biological question, such as "Are There Fragile Regions in the Human Genome?" or "Which DNA Patterns Play the Role of Molecular Clocks?" and then steadily develops the algorithmic sophistication required to answer this question. Hundreds of exercises are incorporated directly into the text as soon as they are needed; readers can test their knowledge through automated coding challenges on Rosalind (http://rosalind.info), an online platform for learning bioinformatics.The textbook website (http://bioinformaticsalgorithms.org) directs readers toward additional educational materials, including video lectures and PowerPoint slides.

Bioinformatics and Functional Genomics

Bioinformatics and Functional Genomics
Author: Jonathan Pevsner
Publsiher: John Wiley & Sons
Total Pages: 792
Release: 2005-03-04
ISBN 10: 0471459178
ISBN 13: 9780471459170
Language: EN, FR, DE, ES & NL

Bioinformatics and Functional Genomics Book Review:

Wiley is proud to announce the publication of the first ever broad-based textbook introduction to Bioinformatics and Functional Genomics by a trained biologist, experienced researcher, and award-winning instructor. In this new text, author Jonathan Pevsner, winner of the 2001 Johns Hopkins University "Teacher of the Year" award, explains problem-solving using bioinformatic approaches using real examples such as breast cancer, HIV-1, and retinal-binding protein throughout. His book includes 375 figures and over 170 tables. Each chapter includes: Problems, discussion of Pitfalls, Boxes explaining key techniques and math/stats principles, Summary, Recommended Reading list, and URLs for freely available software. The text is suitable for professionals and students at every level, including those with little to no background in computer science.

Understanding Bioinformatics

Understanding Bioinformatics
Author: Marketa J. Zvelebil,Marketa Zvelebil,Jeremy O. Baum
Publsiher: Garland Science
Total Pages: 772
Release: 2008
ISBN 10: 9780815340249
ISBN 13: 0815340249
Language: EN, FR, DE, ES & NL

Understanding Bioinformatics Book Review:

Suitable for advanced undergraduates & postgraduates, this book provides a definitive guide to bioinformatics. It takes a conceptual approach & guides the reader from first principles through to an understanding of the computational techniques & the key algorithms.

Introduction to Machine Learning and Bioinformatics

Introduction to Machine Learning and Bioinformatics
Author: Sushmita Mitra,Sujay Datta,Theodore Perkins,George Michailidis
Publsiher: CRC Press
Total Pages: 384
Release: 2008-06-05
ISBN 10: 1420011782
ISBN 13: 9781420011784
Language: EN, FR, DE, ES & NL

Introduction to Machine Learning and Bioinformatics Book Review:

Lucidly Integrates Current Activities Focusing on both fundamentals and recent advances, Introduction to Machine Learning and Bioinformatics presents an informative and accessible account of the ways in which these two increasingly intertwined areas relate to each other. Examines Connections between Machine Learning & Bioinformatics The book begins with a brief historical overview of the technological developments in biology. It then describes the main problems in bioinformatics and the fundamental concepts and algorithms of machine learning. After forming this foundation, the authors explore how machine learning techniques apply to bioinformatics problems, such as electron density map interpretation, biclustering, DNA sequence analysis, and tumor classification. They also include exercises at the end of some chapters and offer supplementary materials on their website. Explores How Machine Learning Techniques Can Help Solve Bioinformatics Problems Shedding light on aspects of both machine learning and bioinformatics, this text shows how the innovative tools and techniques of machine learning help extract knowledge from the deluge of information produced by today’s biological experiments.

Bioinformatics and Molecular Evolution

Bioinformatics and Molecular Evolution
Author: Paul G. Higgs,Teresa K. Attwood
Publsiher: John Wiley & Sons
Total Pages: 384
Release: 2013-04-30
ISBN 10: 1118697065
ISBN 13: 9781118697061
Language: EN, FR, DE, ES & NL

Bioinformatics and Molecular Evolution Book Review:

In the current era of complete genome sequencing, Bioinformatics and Molecular Evolution provides an up-to-date and comprehensive introduction to bioinformatics in the context of evolutionary biology. This accessible text: provides a thorough examination of sequence analysis, biological databases, pattern recognition, and applications to genomics, microarrays, and proteomics emphasizes the theoretical and statistical methods used in bioinformatics programs in a way that is accessible to biological science students places bioinformatics in the context of evolutionary biology, including population genetics, molecular evolution, molecular phylogenetics, and their applications features end-of-chapter problems and self-tests to help students synthesize the materials and apply their understanding is accompanied by a dedicated website - www.blackwellpublishing.com/higgs - containing downloadable sequences, links to web resources, answers to self-test questions, and all artwork in downloadable format (artwork also available to instructors on CD-ROM). This important textbook will equip readers with a thorough understanding of the quantitative methods used in the analysis of molecular evolution, and will be essential reading for advanced undergraduates, graduates, and researchers in molecular biology, genetics, genomics, computational biology, and bioinformatics courses.

Practical Bioinformatics

Practical Bioinformatics
Author: Michael Agostino
Publsiher: Garland Science
Total Pages: 384
Release: 2012-09-26
ISBN 10: 1134063989
ISBN 13: 9781134063987
Language: EN, FR, DE, ES & NL

Practical Bioinformatics Book Review:

Practical Bioinformatics is specifically designed for biology majors, with a heavy emphasis on the steps required to perform bioinformatics analysis to answer biological questions. It is written for courses that have a practical, hands-on element and contains many exercises (for example, database searches, protein analysis, data interpretation) to